DNA Sequences

DNA sequences are listed 5' to 3', grouped by the figures they were used to produce. The same strands may be used in multiple experiments, in which case they are listed multiple times here. Colors refer to Figure 1. (Note: As this paper was being prepared, we noticed a two base mismatch in unit C of ABCD-hat.)


DAO-E AB lattice, Fig. 3a

 unit A

 yellow: TCACTCTACCGCACCAGAATGGAGAT 
 red:    CATTCTGGACGCCATAAGATAGCACCTCGACTCATTTGCCTGCGGTAG
 blue:   CAGTAGCCTGCTATCTTATGGCGTGGCAAATGAGTCGAGGACGGATCG
 green:  TCACTCGATCCGTGGCTACTGGAGAT

 unit B

 red:    AGTGAGGCAATCCACAACCGCATCTC 
 yellow: GCGGTTGTCCAACTTACCAGATCCACAAGCCGACGTTACAGGATTGCC
 green:  GCTCTACAGGATCTGGTAAGTTGGTGTAACGTCGGCTTGTCCGTTCGC
 blue:   AGTGAGCGAACGGTGTAGAGCATCTC


DAO-E AB-hat lattice, Figs. 3b and 3c

 unit A

 yellow: TCACTCTACCGCACCAGAATGGAGAT 
 red:    CATTCTGGACGCCATAAGATAGCACCTCGACTCATTTGCCTGCGGTAG
 blue:   CAGTAGCCTGCTATCTTATGGCGTGGCAAATGAGTCGAGGACGGATCG
 green:  CATACCGATCCGTGGCTACTGTCTTG

 unit B-hat

 red:    AGTGAGGCAATCCACAACCGCATCTC 
 yellow: GCGGTTGTCCAACTCCTAGCGATTTTTCGCTAGGTTTACCAGATCCACAAGCCGACGTTACAGGATTGCC
 green:  GCTCTACAGGATCTCGTAGCAGTTTTCTGCTACGTTGGTAAGTTGGTGTAACGTCGGCTTGTCCGTTCGC
 blue:   GTATGGCGAACGGTGTAGAGCCAAGA


DAO-E AB-hat lattice, Figs. 4a, 4b, 4c

 unit A

 yellow: TCACTCTACCGCACCAGAATGGAGAT 
 red:    CATTCTGGACGCCATAAGATAGCACCTCGACTCATTTGCCTGCGGTAG
 blue:   CAGTAGCCTGCTATCTTATGGCGTGGCAAATGAGTCGAGGACGGATCG
 green:  TCACTCGATCCGTGGCTACTGGAGAT

 unit B-hat

 red:    AGTGAGGCAATCCACAACCGCATCTC 
 yellow: GCGGTTGTCCAACTCCTAGCGATTTTTCGCTAGGTTTACCAGATCCACAAGCCGACGTTACAGGATTGCC
 green:  GCTCTACAGGATCTCGTAGCAGTTTTCTGCTACGTTGGTAAGTTGGTGTAACGTCGGCTTGTCCGTTCGC
 blue:   AGTGAGCGAACGGTGTAGAGCATCTC


DAE-O AB lattice, Figs. 2 and 3d

 unit A

 yellow: GTAGCGCCGTTAGTGGATGTC  
 green:  CGACTGCGGTCAATGCTCACCGATCAACCAG
 cyan:   GCATGTAGTATCGTGGCTGTGTAATCATAGCGGCACCAACTG
 red:    GATGGCGACATCCTGCCGCTATGATTACACAGCCTGAGCATTGACC 
 blue:   CTGACGCTGGTTGATCGGACGATACTACATGCCAGTTGGACTAACGG 

 unit B

 green:  CGTCAGGCTGCTGTGGTCGTG 
 yellow: GCCATCCGTCGATACGGCACCATGATGCACG
 pink:   GGTCACTGGTTAGTGGATTGCGTAGTACAACGCCACCGATGC
 blue:   CGCTACCGTGCATCATGGACTAACCAGTGACCGCATCGGACAGCAGC 
 red:    GCAGTCGCACGACCTGGCGTTGTACTACGCAATCCTGCCGTATCGACG 


DAE-O AB-hat lattice, Fig. 3e

 unit A

 yellow: GTAGCGCCGTTAGTGGATGTC
 green:  GACTGCGTGTCAATGCTCACCGATCAACCAG
 cyan:   TGTAGTATCGTGGCTGTGTAATCATAGCGGCACCAACTGGCA
 red:    GATGGCGACATCCTGCCGCTATGATTACACAGCCTGAGCATTGACAC
 blue:   CTGACGCTGGTTGATCGGACGATACTACATGCCAGTTGGACTAACGG 

 unit B-hat

 green:  CGTCAGGCTGCTGTGGTCGTGC
 yellow: GCCATCCGTCGATACGGCACCATGATGCACG
 pink:   ACTGGTTAGTGGATTGCGTAGGCGAGTAGTTTTCTACTCGCTTTACAACGCCACCGATGCGGTC
 blue:   CGCTACCGTGCATCATGGACTAACCAGTGACCGCATCGGACAGCAGC
 red:    GCAGTCGCACGACCTGGCGTCTGTTGGCTTTTGCCAACAGTTTGTACTACGCAATCCTGCCGTATCGACG


DAE-O AB-hat lattice, Fig. 3f

 unit A

 yellow: GTAGCGCCGTTAGTGGATGTC
 green:  GACTGCGTGTCAATGCTCACCGATCAACCAG
 cyan:   TGTAGTATCGTGGCTGTGTAATCATAGCGGCACCAACTGGCA
 red:    GATGGCGACATCCTGCCGCTATGATTACACAGCCTGAGCATTGACAC
 blue:   CTGACGCTGGTTGATCGGACGATACTACATGCCAGTTGGACTAACGG 

 unit B-hat
 
 green:  CGTCAGGCTGCTGTGGTCGTGC
 yellow: GCCATCCGTCGATACGGCACCATGATGCACG
 pink:   AGTACAACGCCACCGATGCGGTCACTGGTTAGTGGATTGCGT
 blue:   CGCTACCGTGCATCATGGACTAACCAGTGCTCGCTGATTTTTCAGCGAGTTACCGCATCGGACAGCAGC
 red:    GCAGTCGCACGACCTGGCGTCTGTTGGCTTTTGCCAACAGTTTGTACTACGCAATCCTGCCGTATCGACG


DAE-O ABCD-hat lattice, Figs 4e and 4f.

 unit A

         CACAGCGGTAGCGTGGACTAG 
         GACTGCCGACTGGTGCTCACCGTAGTTGCTG
         GCAGTACGTGTGGCACAACGGCATGACATACACCGATACGAT
         ACTATGCTAGTCCTGTATGTCATGCCGTTGTGCCTGAGCACCAGTCG 
         CTGACGCAGCAACTACGGACACGTACTGCATCGTATCGGACGCTACC 

 unit B

         CAACGAGCAATCGTGGCTGCCG
         CATAGTCGTAGTGTCATCACCAGTTGTATCG
         ACATACGCAGTGGATAGCGACCAACCGTTACACCGATGCGGT
         GCTGTGCGATACAACTGGACTGCGTATGTACCGCATCGGACGATTGC 
         TGAACTCGGCAGCCTGTAACGGTTGGTCGCTATCCTGATGACACTACG 

 unit C

         GTAGCGCCGTTAGTGGATGTC
         AGTTCACGGTCAATGCTCACCGATCAACCAG
         TGTAGTATCGTGGCTGTGTAATCATAGCGGCACCAACTGGCA
         GATGGCGACATCCTGCCGCTATGATTACACAGCCTGAGCATTGACAC 
         TCGTTGCTGGTTGATCGGACGATACTACATGCCAGTTGGACTAACGG 

 unit D-hat
 
         CGTCAGGCTGCTGTGGTCGTGC
         GCCATCCGTCGATACGGCACCATGATGCACG
         AGTACAACGCCACCGATGCGGTCACTGGTTAGTGGATTGCGT
         CGCTACCGTGCATCATGGACTAACCAGTGCTCGCTGATTTTTCAGCGAGTTACCGCATCGGACAGCAGC
         GCAGTCGCACGACCTGGCGTCTGTTGGCTTTTGCCAACAGTTTGTACTACGCAATCCTGCCGTATCGACG